Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs11713290 chr3:52971579 G/A 2.18E-14 254 30.93 34.57 1.17 KM Plot
SARC rs11713859 chr3:53042080 C/A 1.67E-14 257 30.93 35.37 1.17 KM Plot
SARC rs11713926 chr3:53155072 C/T 0 253 31.93 27.1 2.13 KM Plot
SARC rs11714037 chr3:52971680 C/A 2.09E-14 254 30.85 35.37 1.17 KM Plot
SARC rs11714902 chr3:53101544 G/C 0 258 31.57 33.77 2.13 KM Plot
SARC rs11715231 chr3:52942776 G/A 1.04E-14 257 31.1 34.57 1.17 KM Plot
SARC rs11717132 chr3:52990650 G/A 2.18E-14 254 30.93 34.57 1.17 KM Plot
SARC rs11718388 chr3:53076415 G/A 0 256 32.3 31.97 2.13 KM Plot
SARC rs11718538 chr3:52975987 C/G 2.18E-14 254 30.93 34.57 1.17 KM Plot
SARC rs11718752 chr3:53130745 T/C 0 253 32.5 26.53 2.13 KM Plot
SARC rs11718834 chr3:52963668 A/C 1.5E-14 256 31.1 33.77 1.17 KM Plot
SARC rs11720191 chr3:53013839 T/C 1.93E-14 256 30.85 35.37 1.17 KM Plot
SARC rs11720228 chr3:52877270 G/A 7.52E-12 256 31.27 34.57 3.1 KM Plot
SARC rs11777052 chr8:75952221 C/T 1.81E-5 252 32.9 35.17 18.03 KM Plot
SARC rs11780606 chr8:129355112 G/A 2.22E-13 256 33.9 19.62 3.97 KM Plot